tweakreg_step
The tweakreg_step function (class name TweakRegStep)
is the top-level function used to call the “tweakreg” operation
from the Roman Calibration pipeline.
Roman pipeline step for image alignment.
- class romancal.tweakreg.tweakreg_step.TweakRegStep(name=None, parent=None, config_file=None, _validate_kwds=True, **kws)[source]
TweakRegStep: Image alignment based on catalogs of sources detected in input images.
Create a
Stepinstance.- Parameters:
name (str) – The name of the Step instance. Used in logging messages and in cache filenames. If not provided, one will be generated based on the class name.
parent (
Step) – The parent step of this step. Used to determine a fully-qualified name for this step, and to determine the mode in which to run this step.config_file (str or pathlib.Path) – The path to the config file that this step was initialized with. Use to determine relative path names of other config files.
_validate_kwds (bool) – Validate given
kwsagainst specs/config.**kws (dict) – Additional parameters to set. These will be set as member variables on the new Step instance.
- class_alias = 'tweakreg'
- do_absolute_alignment(ref_image, imcats)[source]
Perform absolute alignment of images.
This method retrieves a reference image and performs absolute alignment using the specified parameters, including reference WCS information and catalog details. It aligns the provided image catalogs to the absolute reference catalog.
- Parameters:
ref_image (DataModel) – The reference image used for alignment, which contains WCS information.
imcats (list) – A list of image catalogs containing source information for alignment.
- Return type:
None
- do_relative_alignment(imcats)[source]
Perform relative alignment of images.
This method performs relative alignment with the specified parameters, including search radius, separation, and fitting geometry.
- Parameters:
imcats (list) – A list of image catalogs containing source information for alignment.
- Return type:
None
- get_tweakreg_catalog(source_catalog, image_model)[source]
Retrieve the tweakreg catalog from source detection.
This method checks the source detection metadata for the presence of a tweakreg catalog data or a string with its name. It returns the catalog as a Table object if either is found, or raises an error if neither is available.
- Parameters:
source_catalog (object) – The source catalog metadata containing catalog information.
image_model (DataModel) – The image model associated with the source detection.
- Returns:
The retrieved tweakreg catalog as a Table object.
- Return type:
Table
- Raises:
AttributeError – If the required catalog information is missing from the source detection.
- process(dataset)[source]
This is where real work happens. Every Step subclass has to override this method. The default behaviour is to raise a NotImplementedError exception.
- read_catalog(catalog_name)[source]
Reads a source catalog from a specified file.
This function determines the format of the catalog based on the file extension:
“asdf”: uses roman datamodels
“parquet”: uses pyarrow
otherwise: uses astropy Table.
- Parameters:
catalog_name (str) – The name of the catalog file to read.
- Returns:
The read catalog as a Table object.
- Return type:
Table
- Raises:
ValueError – If the catalog format is unsupported.
- reference_file_types: ClassVar = []
- save_model(result, *args, **kwargs)[source]
Saves the given model using the step/pipeline’s naming scheme
- Parameters:
model (a instance of AbstractDataModel) – The model to save.
suffix (str) – The suffix to add to the filename.
idx (object) – Index identifier.
output_file (str) – Use this file name instead of what the Step default would be.
force (bool) – Regardless of whether
save_resultsisFalseand nooutput_fileis specified, try saving.components (dict) – Other components to add to the file name.
- Returns:
output_paths – List of output file paths the model(s) were saved in.
- Return type:
[str[, …]]
- spec = "\n use_custom_catalogs = boolean(default=False) # Use custom user-provided catalogs?\n catalog_format = string(default='ascii.ecsv') # Catalog output file format\n catfile = string(default='') # Name of the file with a list of custom user-provided catalogs\n catalog_path = string(default='') # Catalog output file path\n enforce_user_order = boolean(default=False) # Align images in user specified order?\n expand_refcat = boolean(default=False) # Expand reference catalog with new sources?\n minobj = integer(default=15) # Minimum number of objects acceptable for matching\n searchrad = float(default=2.0) # The search radius in arcsec for a match\n use2dhist = boolean(default=True) # Use 2d histogram to find initial offset?\n separation = float(default=1.0) # Minimum object separation in arcsec\n tolerance = float(default=0.7) # Matching tolerance for xyxymatch in arcsec\n fitgeometry = option('shift', 'rshift', 'rscale', 'general', default='rshift') # Fitting geometry\n nclip = integer(min=0, default=3) # Number of clipping iterations in fit\n sigma = float(min=0.0, default=3.0) # Clipping limit in sigma units\n abs_refcat = string(default='GAIADR3_S3') # Absolute reference catalog\n save_abs_catalog = boolean(default=False) # Write out used absolute astrometric reference catalog as a separate product\n abs_minobj = integer(default=15) # Minimum number of objects acceptable for matching when performing absolute astrometry\n abs_searchrad = float(default=6.0) # The search radius in arcsec for a match when performing absolute astrometry\n # We encourage setting this parameter to True. Otherwise, xoffset and yoffset will be set to zero.\n abs_use2dhist = boolean(default=True) # Use 2D histogram to find initial offset when performing absolute astrometry?\n abs_separation = float(default=1.0) # Minimum object separation in arcsec when performing absolute astrometry\n abs_tolerance = float(default=0.7) # Matching tolerance for xyxymatch in arcsec when performing absolute astrometry\n # Fitting geometry when performing absolute astrometry\n abs_fitgeometry = option('shift', 'rshift', 'rscale', 'general', default='rshift')\n abs_nclip = integer(min=0, default=3) # Number of clipping iterations in fit when performing absolute astrometry\n abs_sigma = float(min=0.0, default=3.0) # Clipping limit in sigma units when performing absolute astrometry\n output_use_model = boolean(default=True) # When saving use `DataModel.meta.filename`\n update_source_catalog_coordinates = boolean(default=False) # Update source catalog file with tweaked coordinates?\n vo_timeout = float(min=0, default=1200.) # VO catalog service timeout.\n "
- update_catalog_coordinates(tweakreg_catalog_name, tweaked_wcs)[source]
Update the source catalog coordinates using the tweaked WCS.
- Parameters:
tweakreg_catalog_name (str) – The name of the TweakReg catalog file produced by
SourceCatalog.tweaked_wcs (
gwcs.wcs.WCS) – The tweaked World Coordinate System (WCS) object.
- Return type:
None